The medical transporter was a transporter aboard USS Voyager, located inside sickbay. It was used for transports within sickbay for medical purposes.

During the birth of Naomi Wildman the medical transporter was used to transport the baby from Samantha Wildman's body in order to save Naomi's life. (VOY: "Deadlock")

When Tuvok and Neelix were merged into Tuvix due to a transporter incident, The Doctor used an isotope to detect the patterns of Tuvok and Neelix and then "split" them again using the medical transporter. (VOY: "Tuvix")